Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of 2127_2127, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

2127_2127

2127_2127 is a Labrador Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See 2127_2127 in the atlas
About 2127_2127

2127_2127 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
2127_2127's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 2127_2127's. Click any of them to keep exploring.

  1. PFZ1B07_PFZ1B07 Labrador Retriever 20.72
  2. PFZ2B12_PFZ2B12 Labrador Retriever 21.02
  3. PFZ17H10_PFZ17H10 Labrador Retriever 21.58
  4. 5221_5221 Labrador Retriever 21.62
  5. 5300_5300 Labrador Retriever 21.77
2127_2127's breed

2127_2127 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.381
y 0.589
z 5.795
PCA-256 distance from breed centroid
48.83
Outlier percentile in breed
10
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 2127_2127 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC36 z = -2.61
  • chr18:29,956,251 loading 0.0345
  • chr26:19,556,698 loading 0.0316
  • chr21:15,780,220 loading -0.0288
PC105 z = -2.00
  • chr9:10,719,447 loading 0.0424
  • chr34:1,972,619 loading -0.0401
  • chr34:1,432,211 loading -0.0400
PC32 z = 1.94
  • chr23:20,231,163 loading 0.0295
  • chr22:42,651,822 loading -0.0294
  • chr27:39,738,665 loading 0.0291
Ancestry reconstruction error: 0.87
Back to the Atlas →