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CanVAS NA · Founder
Cosmic medallion portrait of 2_G0380_0005
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

2_G0380_0005

2_G0380_0005 is a research dog from the NA cohort. They weren't given a breed label - they're one of the dogs that helps the atlas understand what falls between breeds.

See 2_G0380_0005 in the atlas
About 2_G0380_0005
  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
2_G0380_0005's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 2_G0380_0005's. Click any of them to keep exploring.

  1. 1_G0380_0004 Labrador Retriever 3.58
  2. 378_G0380_0665 Labrador Retriever 22.71
  3. 554_380G_2412 Labrador Retriever 23.55
  4. 133_G0380_0298 Labrador Retriever 24.23
  5. 331_G0380_0581 Labrador Retriever 24.58
2_G0380_0005's breed

2_G0380_0005's genome decomposes mostly into Labrador Retriever, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 75%
  2. Golden Retriever 25%
Source

From the CanVAS .

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.208
y 9.193
z 9.843
Top-3 principal components by |z|

The 3 PCs on which 2_G0380_0005 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC251 z = -3.97
  • chr25:40,121,397 loading 0.0326
  • chr28:17,013,099 loading 0.0310
  • chr26:15,170,564 loading 0.0302
PC247 z = 3.74
  • chr3:7,959,527 loading 0.0294
  • chr16:43,038,278 loading -0.0293
  • chr19:17,213,086 loading 0.0288
PC233 z = 3.64
  • chr16:48,608,303 loading 0.0348
  • chr13:24,655,299 loading -0.0330
  • chr23:1,734,032 loading 0.0330
Ancestry reconstruction error: 0.54
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