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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of 3112_3112, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

3112_3112

3112_3112 is a Labrador Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See 3112_3112 in the atlas
About 3112_3112

3112_3112 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
3112_3112's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 3112_3112's. Click any of them to keep exploring.

  1. PFZ1H05_PFZ1H05 Labrador Retriever 21.18
  2. PFZ32F09_PFZ32F09 Labrador Retriever 23.80
  3. PFZ13D07_PFZ13D07 Labrador Retriever 24.04
  4. PFZ5G05_PFZ5G05 Labrador Retriever 24.07
  5. LRe_GT275_LRe_GT275 Labrador Retriever 24.22
3112_3112's breed

3112_3112 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 73%
  2. Golden Retriever 27%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.390
y 0.539
z 6.026
PCA-256 distance from breed centroid
47.03
Outlier percentile in breed
3
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 3112_3112 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC225 z = 2.37
  • chr23:37,382,588 loading 0.0307
  • chr7:21,991,064 loading -0.0305
  • chr6:50,176,215 loading 0.0304
PC244 z = 1.94
  • chr9:27,289,940 loading 0.0354
  • chr25:21,796,415 loading 0.0335
  • chr20:38,277,512 loading -0.0333
PC3 z = -1.55
  • chr6:50,750,182 loading 0.0295
  • chr6:65,585,567 loading 0.0275
  • chr1:14,618,344 loading 0.0264
Ancestry reconstruction error: 0.87
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