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CanVAS Wiener · Founder
Cosmic medallion portrait of 390_G0380_0709, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

390_G0380_0709

390_G0380_0709 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 390_G0380_0709 in the atlas
About 390_G0380_0709

390_G0380_0709 sits well inside the Labrador Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
390_G0380_0709's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 390_G0380_0709's. Click any of them to keep exploring.

  1. 610_G0380_0684 Labrador Retriever 16.18
  2. 541_380G_2399 Labrador Retriever 16.76
  3. 44_G0380_0115 Labrador Retriever 20.13
  4. 356_G0380_0624 Labrador Retriever 22.32
  5. 303_G0380_0541 Labrador Retriever 23.02
390_G0380_0709's breed

390_G0380_0709 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.591
y 7.901
z 10.905
PCA-256 distance from breed centroid
58.13
Outlier percentile in breed
43
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 390_G0380_0709 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC249 z = -3.58
  • chr6:30,830,915 loading 0.0329
  • chr1:22,842,587 loading 0.0316
  • chr7:61,438,680 loading -0.0291
PC253 z = -2.89
  • chr27:12,240,889 loading 0.0349
  • chr22:40,186,686 loading -0.0299
  • chr3:9,727,004 loading 0.0298
PC189 z = 2.72
  • chr11:28,721,751 loading 0.0412
  • chr14:3,689,618 loading -0.0355
  • chr11:17,928,935 loading -0.0339
Ancestry reconstruction error: 0.50
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