Skip to main content
snıff
CanVAS Wiener · Founder
Cosmic medallion portrait of 517_G0380_1123, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

517_G0380_1123

517_G0380_1123 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 517_G0380_1123 in the atlas
About 517_G0380_1123

517_G0380_1123 sits well inside the Labrador Retriever cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
517_G0380_1123's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 517_G0380_1123's. Click any of them to keep exploring.

  1. 850_380G_1531 Labrador Retriever 20.59
  2. 337_G0380_0590 Labrador Retriever 21.14
  3. 413_G0380_0807 Labrador Retriever 21.16
  4. 815_380G_1539 Labrador Retriever 21.46
  5. 288_G0380_0520 Labrador Retriever 21.55
517_G0380_1123's breed

517_G0380_1123 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 75%
  2. Golden Retriever 25%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.857
y 8.427
z 10.432
PCA-256 distance from breed centroid
56.73
Outlier percentile in breed
35
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 517_G0380_1123 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC10 z = 2.98
  • chr13:43,330,325 loading 0.0255
  • chr17:50,562,684 loading 0.0245
  • chr19:34,146,978 loading 0.0244
PC203 z = -2.68
  • chr1:100,458,946 loading 0.0361
  • chr1:100,542,384 loading 0.0353
  • chr24:4,330,562 loading -0.0340
PC222 z = 2.42
  • chr12:60,458,843 loading 0.0369
  • chr13:14,089,127 loading 0.0363
  • chr34:29,222,122 loading -0.0309
Ancestry reconstruction error: 0.46
Back to the Atlas →