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CanVAS Wiener · Founder
Cosmic medallion portrait of 530_380G_2388, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

530_380G_2388

530_380G_2388 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 530_380G_2388 in the atlas
About 530_380G_2388

530_380G_2388 sits at the edge of the Labrador Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
530_380G_2388's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 530_380G_2388's. Click any of them to keep exploring.

  1. 407_G0380_0787 Labrador Retriever 18.00
  2. 64_G0380_0182 Labrador Retriever 18.17
  3. 264_G0380_0483 Labrador Retriever 18.40
  4. 193_G0380_0378 Labrador Retriever 18.93
  5. 813_380G_1518 Labrador Retriever 20.54
530_380G_2388's breed

530_380G_2388 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 75%
  2. Golden Retriever 25%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.106
y 10.132
z 9.934
PCA-256 distance from breed centroid
63.85
Outlier percentile in breed
74
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 530_380G_2388 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC140 z = -5.43
  • chr19:4,037,398 loading 0.0415
  • chr19:5,321,387 loading 0.0400
  • chr19:5,388,895 loading -0.0395
PC129 z = -3.48
  • chr9:12,031,144 loading 0.0367
  • chr13:1,840,654 loading -0.0344
  • chr9:14,628,871 loading -0.0343
PC149 z = 3.26
  • chr14:37,146,317 loading 0.0319
  • chr1:49,304,485 loading -0.0313
  • chr1:61,522,946 loading -0.0291
Ancestry reconstruction error: 0.55
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