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CanVAS Wiener · Founder
Cosmic medallion portrait of 531_380G_2389, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

531_380G_2389

531_380G_2389 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 531_380G_2389 in the atlas
About 531_380G_2389

531_380G_2389 is a notable Labrador Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
531_380G_2389's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 531_380G_2389's. Click any of them to keep exploring.

  1. 199_G0380_0385 Labrador Retriever 23.97
  2. 906_380G_1626 Labrador Retriever 24.03
  3. 481_G0380_1026 Labrador Retriever 24.22
  4. 891_380G_1580 Labrador Retriever 24.26
  5. 950_380G_1577 Labrador Retriever 24.79
531_380G_2389's breed

531_380G_2389 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 74%
  2. Golden Retriever 26%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.534
y 9.552
z 9.466
PCA-256 distance from breed centroid
65.10
Outlier percentile in breed
80
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 531_380G_2389 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC25 z = -4.35
  • chr5:76,272,702 loading 0.0268
  • chr15:24,890,350 loading -0.0263
  • chr4:32,151,890 loading 0.0256
PC250 z = -3.76
  • chr9:17,840,166 loading 0.0300
  • chr9:50,441,577 loading 0.0297
  • chr15:28,843,971 loading -0.0296
PC208 z = -3.47
  • chr17:4,173,842 loading 0.0377
  • chr17:4,128,965 loading 0.0376
  • chr17:4,233,511 loading 0.0366
Ancestry reconstruction error: 0.55
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