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CanVAS Wiener · Founder
Cosmic medallion portrait of 558_380G_2416, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

558_380G_2416

558_380G_2416 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 558_380G_2416 in the atlas
About 558_380G_2416

558_380G_2416 is a notable Labrador Retriever - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
558_380G_2416's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 558_380G_2416's. Click any of them to keep exploring.

  1. 946_380G_1742 Labrador Retriever 22.85
  2. 918_380G_1627 Labrador Retriever 24.33
  3. 9_G0380_0019 Labrador Retriever 26.67
  4. 836_380G_1509 Labrador Retriever 26.80
  5. 438_G0380_0866 Labrador Retriever 26.82
558_380G_2416's breed

558_380G_2416 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 74%
  2. Golden Retriever 26%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.268
y 9.547
z 9.423
PCA-256 distance from breed centroid
66.33
Outlier percentile in breed
83
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 558_380G_2416 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC245 z = 3.93
  • chr5:79,585,745 loading 0.0313
  • chr14:5,105,246 loading 0.0300
  • chr24:4,166,647 loading -0.0289
PC25 z = -3.88
  • chr5:76,272,702 loading 0.0268
  • chr15:24,890,350 loading -0.0263
  • chr4:32,151,890 loading 0.0256
PC202 z = 3.69
  • chr7:2,141,056 loading 0.0366
  • chr14:36,686,192 loading -0.0363
  • chr14:12,756,008 loading -0.0320
Ancestry reconstruction error: 0.57
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