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CanVAS Wiener · Founder
Cosmic medallion portrait of 628_G0380_0376, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

628_G0380_0376

628_G0380_0376 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 628_G0380_0376 in the atlas
About 628_G0380_0376

628_G0380_0376 sits at the edge of the Labrador Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
628_G0380_0376's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 628_G0380_0376's. Click any of them to keep exploring.

  1. 60_G0380_0167 Labrador Retriever 20.38
  2. 522_G0380_1135 Labrador Retriever 21.96
  3. 606_G0380_0472 Labrador Retriever 23.07
  4. 770_380G_1395 Labrador Retriever 24.24
  5. 904_380G_1599 Labrador Retriever 25.00
628_G0380_0376's breed

628_G0380_0376 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 74%
  2. Golden Retriever 26%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.929
y 9.323
z 9.714
PCA-256 distance from breed centroid
60.71
Outlier percentile in breed
58
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 628_G0380_0376 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC253 z = 4.43
  • chr27:12,240,889 loading 0.0349
  • chr22:40,186,686 loading -0.0299
  • chr3:9,727,004 loading 0.0298
PC252 z = 3.49
  • chr19:30,132,204 loading 0.0320
  • chr25:21,796,415 loading -0.0316
  • chr3:5,565,848 loading 0.0303
PC251 z = -3.44
  • chr25:40,121,397 loading 0.0326
  • chr28:17,013,099 loading 0.0310
  • chr26:15,170,564 loading 0.0302
Ancestry reconstruction error: 0.51
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