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CanVAS Wiener · Founder
Cosmic medallion portrait of 901_380G_1559, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

901_380G_1559

901_380G_1559 is a Labrador Retriever from the Wiener research cohort. One of 14,478 dogs who built the atlas.

See 901_380G_1559 in the atlas
About 901_380G_1559

901_380G_1559 sits well inside the Labrador Retriever cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
901_380G_1559's nearest neighbors

The five dogs in the atlas whose genomes sit closest to 901_380G_1559's. Click any of them to keep exploring.

  1. 505_G0380_1094 Labrador Retriever 21.18
  2. 546_380G_2404 Labrador Retriever 21.45
  3. 607_G0380_0524 Labrador Retriever 21.84
  4. 273_G0380_0494 Labrador Retriever 22.16
  5. 420_G0380_0831 Labrador Retriever 22.26
901_380G_1559's breed

901_380G_1559 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Wiener cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.898
y 9.198
z 10.145
PCA-256 distance from breed centroid
57.20
Outlier percentile in breed
37
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which 901_380G_1559 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC198 z = -3.14
  • chr2:48,735,597 loading 0.0380
  • chr23:1,924,139 loading -0.0317
  • chr23:1,615,600 loading -0.0317
PC10 z = 2.84
  • chr13:43,330,325 loading 0.0255
  • chr17:50,562,684 loading 0.0245
  • chr19:34,146,978 loading 0.0244
PC222 z = -2.81
  • chr12:60,458,843 loading 0.0369
  • chr13:14,089,127 loading 0.0363
  • chr34:29,222,122 loading -0.0309
Ancestry reconstruction error: 0.47
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