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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of B2-HUC20-MALE-5612_B2-HUC20-MALE-5612, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

B2-HUC20-MALE-5612_B2-HUC20-MALE-5612

B2-HUC20-MALE-5612_B2-HUC20-MALE-5612 is a Boxer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See B2-HUC20-MALE-5612_B2-HUC20-MALE-5612 in the atlas
About B2-HUC20-MALE-5612_B2-HUC20-MALE-5612

B2-HUC20-MALE-5612_B2-HUC20-MALE-5612 is a notable Boxer - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
B2-HUC20-MALE-5612_B2-HUC20-MALE-5612's nearest neighbors

The five dogs in the atlas whose genomes sit closest to B2-HUC20-MALE-5612_B2-HUC20-MALE-5612's. Click any of them to keep exploring.

  1. cHD11_131_cHD11_131 Boxer 16.62
  2. cHD11_112_cHD11_112 Boxer 17.34
  3. cHD11_126_cHD11_126 Boxer 17.47
  4. cHD11_124_cHD11_124 Boxer 17.55
  5. B_32562_B_32562 Boxer 18.07
B2-HUC20-MALE-5612_B2-HUC20-MALE-5612's breed

B2-HUC20-MALE-5612_B2-HUC20-MALE-5612 sits in the Boxer cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 90%
  2. Labrador Retriever 5%
  3. Golden Retriever 5%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/A
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 T/T
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.562
y 0.287
z -0.878
PCA-256 distance from breed centroid
24.80
Outlier percentile in breed
79
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which B2-HUC20-MALE-5612_B2-HUC20-MALE-5612 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -6.35
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC7 z = -3.15
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
PC133 z = -2.70
  • chr6:3,210,008 loading 0.0329
  • chr28:1,791,942 loading 0.0327
  • chr28:1,882,913 loading 0.0326
Ancestry reconstruction error: 0.28
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