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CanVAS Spatola · Founder
Cosmic medallion portrait of BERD_BERD_35H12, a Bergamasco
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BERD_BERD_35H12

BERD_BERD_35H12 is a Bergamasco from the Spatola research cohort. One of 14,478 dogs who built the atlas.

See BERD_BERD_35H12 in the atlas
About BERD_BERD_35H12
  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
BERD_BERD_35H12's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BERD_BERD_35H12's. Click any of them to keep exploring.

  1. BERD_BERD_34H11 Bergamasco 12.55
  2. BERD_BERD_25G02 Bergamasco 13.19
  3. Chern_City_Chern_City_69 Feral Dog Chernobyl 37.04
  4. POL_POL_8PL Polish Lowland Sheepdog 37.28
  5. POL_POL_9PL Polish Lowland Sheepdog 37.29
BERD_BERD_35H12's breed

BERD_BERD_35H12 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 57%
  2. Golden Retriever 43%
Source

From the CanVAS (Spatola cohort) . Breed-page reference: Bergamasco.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.853
y 5.177
z 4.830
Top-3 principal components by |z|

The 3 PCs on which BERD_BERD_35H12 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC255 z = -5.86
  • chr23:37,041,440 loading 0.0347
  • chr1:100,944,840 loading 0.0344
  • chr1:101,382,836 loading -0.0320
PC207 z = -4.35
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
PC197 z = 4.24
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
Ancestry reconstruction error: 0.49
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