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CanVAS Hedan · Founder
Cosmic medallion portrait of Bernese_Mountain_Dog_9038, a Bernese Mountain Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Bernese_Mountain_Dog_9038

Bernese_Mountain_Dog_9038 is a Bernese Mountain Dog from the Hedan research cohort. One of 14,478 dogs who built the atlas.

See Bernese_Mountain_Dog_9038 in the atlas
About Bernese_Mountain_Dog_9038

Bernese_Mountain_Dog_9038 sits well inside the Bernese Mountain Dog cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
Bernese_Mountain_Dog_9038's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Bernese_Mountain_Dog_9038's. Click any of them to keep exploring.

  1. Bernese_Mountain_Dog_8706 Bernese Mountain Dog 11.72
  2. Bernese_Mountain_Dog_2956 Bernese Mountain Dog 15.82
  3. Bernese_Mountain_Dog_2542 Bernese Mountain Dog 20.42
  4. Bernese_Mountain_Dog_3286 Bernese Mountain Dog 20.70
  5. Bernese_Mountain_Dog_1297 Labrador Retriever 21.54
Bernese_Mountain_Dog_9038's breed

Bernese_Mountain_Dog_9038 sits firmly in the Bernese Mountain Dog cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Bernese Mountain Dog 100%
Source

From the CanVAS (Hedan cohort) . Breed-page reference: Bernese Mountain Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 –
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -0.322
y 5.231
z -4.394
PCA-256 distance from breed centroid
24.02
Outlier percentile in breed
50
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Bernese_Mountain_Dog_9038 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC2 z = 4.40
  • chr32:5,376,122 loading 0.0244
  • chr22:41,669,426 loading -0.0232
  • chr9:23,202,173 loading 0.0228
PC243 z = 2.94
  • chr28:2,607,542 loading 0.0337
  • chr6:55,527,821 loading 0.0334
  • chr28:36,111,093 loading -0.0311
PC3 z = -2.89
  • chr6:50,750,182 loading 0.0295
  • chr6:65,585,567 loading 0.0275
  • chr1:14,618,344 loading 0.0264
Ancestry reconstruction error: 0.29
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