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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of BGVP_29686_BGVP_29686, a Petit Basset Griffon Vendeen
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BGVP_29686_BGVP_29686

BGVP_29686_BGVP_29686 is a Petit Basset Griffon Vendeen from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See BGVP_29686_BGVP_29686 in the atlas
About BGVP_29686_BGVP_29686

BGVP_29686_BGVP_29686 is a strong genetic outlier within the Petit Basset Griffon Vendeen cluster - among the most distinctive examples of their breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
BGVP_29686_BGVP_29686's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BGVP_29686_BGVP_29686's. Click any of them to keep exploring.

  1. BGVP_17289_BGVP_17289 Petit Basset Griffon Vendeen 16.39
  2. BGV_G_27325_BGV_G_27325 Grand Basset Griffon Vendeen 18.60
  3. PFZ35B12_PFZ35B12 Redbone Coonhound 31.74
  4. HR18_HR18 Posavski Goni 31.87
  5. PFZ33G01_PFZ33G01 Catahoula Leopard Dog 32.21
BGVP_29686_BGVP_29686's breed

BGVP_29686_BGVP_29686 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Petit Basset Griffon Vendeen.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/T
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.430
y 1.145
z 1.940
PCA-256 distance from breed centroid
33.61
Outlier percentile in breed
92
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which BGVP_29686_BGVP_29686 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC210 z = 3.37
  • chr14:14,236,787 loading 0.0332
  • chr19:34,609,563 loading -0.0320
  • chr24:23,645,624 loading 0.0312
PC173 z = 2.85
  • chr17:4,173,842 loading 0.0406
  • chr17:4,233,511 loading 0.0400
  • chr17:4,353,120 loading 0.0343
PC254 z = 2.83
  • chr6:33,386,202 loading 0.0315
  • chr26:12,107,781 loading 0.0293
  • chr1:50,654,367 loading 0.0289
Ancestry reconstruction error: 0.76
Back to the Atlas →