Skip to main content
snıff
CanVAS Shannon · Founder
Cosmic medallion portrait of BSJI_12210_BSJI_12210, a Basenji
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BSJI_12210_BSJI_12210

BSJI_12210_BSJI_12210 is a Basenji from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See BSJI_12210_BSJI_12210 in the atlas
About BSJI_12210_BSJI_12210

BSJI_12210_BSJI_12210 sits at the edge of the Basenji cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
BSJI_12210_BSJI_12210's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BSJI_12210_BSJI_12210's. Click any of them to keep exploring.

  1. BSJI_2234_BSJI_2234 Basenji 10.47
  2. BSJI_8982_BSJI_8982 Basenji 11.19
  3. PFZ2D04_PFZ2D04 Basenji 12.13
  4. BSJI_3454_BSJI_3454 Basenji 12.31
  5. BSJI_8999_BSJI_8999 Basenji 14.82
BSJI_12210_BSJI_12210's breed

BSJI_12210_BSJI_12210 sits in the Basenji cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Basenji 88%
  2. Labrador Retriever 6%
  3. Golden Retriever 6%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Basenji.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL A/A
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.880
y 1.284
z -0.373
PCA-256 distance from breed centroid
27.35
Outlier percentile in breed
70
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which BSJI_12210_BSJI_12210 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC26 z = -11.70
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC27 z = -8.95
  • chr12:64,188,765 loading 0.0337
  • chr23:18,821,315 loading -0.0287
  • chr4:53,307,196 loading -0.0287
PC59 z = 4.10
  • chr13:17,017,437 loading 0.0335
  • chr22:61,087,087 loading -0.0324
  • chr13:7,369,721 loading -0.0313
Ancestry reconstruction error: 0.18
Back to the Atlas →