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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of BSJI_83980_BSJI_83980, a Basenji
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

BSJI_83980_BSJI_83980

BSJI_83980_BSJI_83980 is a Basenji from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See BSJI_83980_BSJI_83980 in the atlas
About BSJI_83980_BSJI_83980

BSJI_83980_BSJI_83980 sits well inside the Basenji cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
BSJI_83980_BSJI_83980's nearest neighbors

The five dogs in the atlas whose genomes sit closest to BSJI_83980_BSJI_83980's. Click any of them to keep exploring.

  1. DRC115_DRC115 Village Dog Drc Boende 17.84
  2. DRC107_DRC107 Village Dog Drc Boende 18.23
  3. BSJI_51673_BSJI_51673 Basenji 18.45
  4. BSJI_45738_BSJI_45738 Basenji 18.80
  5. DRC111_DRC111 Village Dog Drc Boende 18.97
BSJI_83980_BSJI_83980's breed

BSJI_83980_BSJI_83980 sits in the Basenji cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Basenji 87%
  2. Golden Retriever 7%
  3. Labrador Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Basenji.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.296
y 1.587
z -0.156
PCA-256 distance from breed centroid
22.70
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which BSJI_83980_BSJI_83980 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC26 z = -7.65
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC27 z = -5.67
  • chr12:64,188,765 loading 0.0337
  • chr23:18,821,315 loading -0.0287
  • chr4:53,307,196 loading -0.0287
PC59 z = 2.83
  • chr13:17,017,437 loading 0.0335
  • chr22:61,087,087 loading -0.0324
  • chr13:7,369,721 loading -0.0313
Ancestry reconstruction error: 0.23
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