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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of CBR_32601_CBR_32601, a Chesapeake Bay Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

CBR_32601_CBR_32601

CBR_32601_CBR_32601 is a Chesapeake Bay Retriever from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See CBR_32601_CBR_32601 in the atlas
About CBR_32601_CBR_32601

CBR_32601_CBR_32601 is a strong genetic outlier within the Chesapeake Bay Retriever cluster - among the most distinctive examples of their breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
CBR_32601_CBR_32601's nearest neighbors

The five dogs in the atlas whose genomes sit closest to CBR_32601_CBR_32601's. Click any of them to keep exploring.

  1. PFZ10F10_PFZ10F10 Chesapeake Bay Retriever 20.02
  2. PFZ11F11_PFZ11F11 Chesapeake Bay Retriever 21.55
  3. PFZ11A09_PFZ11A09 Chesapeake Bay Retriever 21.55
  4. PFZ11H05_PFZ11H05 Chesapeake Bay Retriever 22.86
  5. PFZ11F07_PFZ11F07 Chesapeake Bay Retriever 23.66
CBR_32601_CBR_32601's breed

CBR_32601_CBR_32601 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 59%
  2. Labrador Retriever 41%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Chesapeake Bay Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 10.770
y -4.511
z 11.956
PCA-256 distance from breed centroid
18.92
Outlier percentile in breed
92
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which CBR_32601_CBR_32601 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC179 z = -6.42
  • chr34:3,531,310 loading 0.0341
  • chr34:3,128,578 loading -0.0327
  • chr4:57,360,298 loading -0.0326
PC161 z = -6.02
  • chr25:6,699,887 loading 0.0385
  • chr8:38,372,734 loading -0.0369
  • chr15:23,258,994 loading -0.0343
PC172 z = -4.97
  • chr13:4,083,191 loading 0.0359
  • chr24:4,114,956 loading 0.0356
  • chr13:12,284,714 loading 0.0349
Ancestry reconstruction error: 0.93 (high - dog sits between cluster centroids)
Back to the Atlas →