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CanVAS Biasoli · Founder
Cosmic medallion portrait of cHD10_472_cHD10_472, a Labrador Or Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD10_472_cHD10_472

cHD10_472_cHD10_472 is labelled Labrador Or Golden Retriever in the Biasoli cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See cHD10_472_cHD10_472 in the atlas
About cHD10_472_cHD10_472

cHD10_472_cHD10_472 sits well inside the Labrador Or Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
cHD10_472_cHD10_472's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD10_472_cHD10_472's. Click any of them to keep exploring.

  1. cHD17_493_cHD17_493 Labrador Or Golden Retriever 25.98
  2. cHD10_550_cHD10_550 Labrador Or Golden Retriever 26.64
  3. cHD10_517_cHD10_517 Labrador Or Golden Retriever 26.88
  4. cHD15_51_cHD15_51 Labrador Or Golden Retriever 26.95
  5. cHD8_477_cHD8_477 Labrador Retriever 27.03
cHD10_472_cHD10_472's breed

cHD10_472_cHD10_472's genome decomposes mostly into Labrador Retriever, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 78%
  2. Golden Retriever 23%
Source

From the CanVAS (Biasoli cohort) . Breed-page reference: Labrador Or Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.030
y 0.607
z 7.348
PCA-256 distance from breed centroid
23.83
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD10_472_cHD10_472 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC145 z = -2.33
  • chr19:19,197,831 loading 0.0370
  • chr1:99,774,502 loading -0.0342
  • chr4:60,708,893 loading 0.0329
PC235 z = 2.26
  • chr5:7,618,997 loading 0.0371
  • chr18:10,714,022 loading 0.0318
  • chr25:27,400,046 loading 0.0312
PC188 z = -2.23
  • chr7:21,167,050 loading 0.0346
  • chr25:32,919,094 loading 0.0335
  • chr7:21,698,587 loading 0.0335
Ancestry reconstruction error: 0.87
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