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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD11_128_cHD11_128, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD11_128_cHD11_128

cHD11_128_cHD11_128 is a Boxer from the Momozawa research cohort. One of 14,478 dogs who built the atlas.

See cHD11_128_cHD11_128 in the atlas
About cHD11_128_cHD11_128

cHD11_128_cHD11_128 sits at the edge of the Boxer cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
cHD11_128_cHD11_128's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD11_128_cHD11_128's. Click any of them to keep exploring.

  1. cHD11_130_cHD11_130 Boxer 15.25
  2. PFZ29G03_PFZ29G03 Boxer 16.61
  3. PFZ24E12_PFZ24E12 Boxer 16.84
  4. cHD11_125_cHD11_125 Boxer 16.92
  5. cHD11_129_cHD11_129 Boxer 17.89
cHD11_128_cHD11_128's breed

cHD11_128_cHD11_128 sits firmly in the Boxer cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 100%
Source

From the CanVAS (Momozawa cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 T/T
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.659
y 0.266
z -1.069
PCA-256 distance from breed centroid
19.50
Outlier percentile in breed
59
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD11_128_cHD11_128 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -7.02
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC7 z = -3.43
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
PC5 z = -2.52
  • chr1:24,578,804 loading 0.0240
  • chr2:19,906,795 loading 0.0230
  • chr13:51,091,794 loading 0.0227
Ancestry reconstruction error: 0.20
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