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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD11_134_cHD11_134, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD11_134_cHD11_134

cHD11_134_cHD11_134 is a Boxer from the Momozawa research cohort. One of 14,478 dogs who built the atlas.

See cHD11_134_cHD11_134 in the atlas
About cHD11_134_cHD11_134

cHD11_134_cHD11_134 is a notable Boxer - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
cHD11_134_cHD11_134's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD11_134_cHD11_134's. Click any of them to keep exploring.

  1. cHD11_109_cHD11_109 Boxer 16.00
  2. cHD11_142_cHD11_142 Boxer 16.04
  3. PFZ34C10_PFZ34C10 Boxer 17.10
  4. Box_LU129_Box_LU129 Boxer 17.36
  5. cHD11_127_cHD11_127 Boxer 17.40
cHD11_134_cHD11_134's breed

cHD11_134_cHD11_134 sits in the Boxer cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 94%
  2. Labrador Retriever 6%
Source

From the CanVAS (Momozawa cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.468
y 0.296
z -0.710
PCA-256 distance from breed centroid
34.45
Outlier percentile in breed
89
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD11_134_cHD11_134 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -6.29
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC148 z = 4.45
  • chr6:30,769,727 loading 0.0436
  • chr1:62,992,483 loading -0.0356
  • chr6:30,876,588 loading -0.0355
PC133 z = -4.23
  • chr6:3,210,008 loading 0.0329
  • chr28:1,791,942 loading 0.0327
  • chr28:1,882,913 loading 0.0326
Ancestry reconstruction error: 0.39
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