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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD11_149_cHD11_149, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD11_149_cHD11_149

cHD11_149_cHD11_149 is a Labrador Retriever from the Momozawa research cohort. One of 14,478 dogs who built the atlas.

See cHD11_149_cHD11_149 in the atlas
About cHD11_149_cHD11_149

cHD11_149_cHD11_149 sits at the edge of the Labrador Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
cHD11_149_cHD11_149's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD11_149_cHD11_149's. Click any of them to keep exploring.

  1. cHD8_512_cHD8_512 Labrador Retriever 19.07
  2. 6521_6521 Labrador Retriever 20.26
  3. cHD11_111_cHD11_111 Labrador Retriever 20.98
  4. cHD8_519_cHD8_519 Labrador Retriever 21.48
  5. cHD11_98_cHD11_98 Labrador Retriever 21.50
cHD11_149_cHD11_149's breed

cHD11_149_cHD11_149 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 78%
  2. Golden Retriever 22%
Source

From the CanVAS (Momozawa cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.005
y 0.033
z 8.451
PCA-256 distance from breed centroid
61.90
Outlier percentile in breed
64
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD11_149_cHD11_149 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC20 z = 2.93
  • chr29:37,511,112 loading 0.0311
  • chr15:28,326,342 loading -0.0273
  • chr35:8,740,750 loading 0.0271
PC3 z = -2.90
  • chr6:50,750,182 loading 0.0295
  • chr6:65,585,567 loading 0.0275
  • chr1:14,618,344 loading 0.0264
PC2 z = -2.55
  • chr32:5,376,122 loading 0.0244
  • chr22:41,669,426 loading -0.0232
  • chr9:23,202,173 loading 0.0228
Ancestry reconstruction error: 0.88
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