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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD11_151_cHD11_151, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD11_151_cHD11_151

cHD11_151_cHD11_151 is a Labrador Retriever from the Momozawa research cohort. One of 14,478 dogs who built the atlas.

See cHD11_151_cHD11_151 in the atlas
About cHD11_151_cHD11_151

cHD11_151_cHD11_151 sits well inside the Labrador Retriever cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
cHD11_151_cHD11_151's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD11_151_cHD11_151's. Click any of them to keep exploring.

  1. cHD10_450_cHD10_450 Labrador Or Golden Retriever 25.07
  2. cHD10_449_cHD10_449 Labrador Or Golden Retriever 25.07
  3. cHD10_470_cHD10_470 Labrador Or Golden Retriever 26.20
  4. cHD17_495_cHD17_495 Labrador Or Golden Retriever 26.35
  5. cHD11_120_cHD11_120 Labrador Retriever 26.36
cHD11_151_cHD11_151's breed

cHD11_151_cHD11_151 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 78%
  2. Golden Retriever 22%
Source

From the CanVAS (Momozawa cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.902
y 0.216
z 8.021
PCA-256 distance from breed centroid
55.56
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD11_151_cHD11_151 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC3 z = -2.66
  • chr6:50,750,182 loading 0.0295
  • chr6:65,585,567 loading 0.0275
  • chr1:14,618,344 loading 0.0264
PC2 z = -2.34
  • chr32:5,376,122 loading 0.0244
  • chr22:41,669,426 loading -0.0232
  • chr9:23,202,173 loading 0.0228
PC135 z = -2.09
  • chr8:33,499,010 loading 0.0341
  • chr6:30,409,356 loading -0.0338
  • chr34:15,382,542 loading -0.0330
Ancestry reconstruction error: 0.86
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