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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD17_325_cHD17_325
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD17_325_cHD17_325

cHD17_325_cHD17_325 is a research dog from the Momozawa cohort. They weren't given a breed label - they're one of the dogs that helps the atlas understand what falls between breeds.

See cHD17_325_cHD17_325 in the atlas
About cHD17_325_cHD17_325
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
cHD17_325_cHD17_325's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD17_325_cHD17_325's. Click any of them to keep exploring.

  1. PFZ36G12_PFZ36G12 Labrador Retriever 24.35
  2. cHD11_551_cHD11_551 Labrador Or Golden Retriever 24.61
  3. PFZ43D04_PFZ43D04 Labrador Retriever 24.76
  4. cHD10_515_cHD10_515 Labrador Or Golden Retriever 24.81
  5. cHD8_472_cHD8_472 Labrador Retriever 25.19
cHD17_325_cHD17_325's breed

cHD17_325_cHD17_325's genome decomposes mostly into Labrador Retriever, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Momozawa cohort) .

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.344
y 0.467
z 6.843
Top-3 principal components by |z|

The 3 PCs on which cHD17_325_cHD17_325 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC3 z = -2.05
  • chr6:50,750,182 loading 0.0295
  • chr6:65,585,567 loading 0.0275
  • chr1:14,618,344 loading 0.0264
PC170 z = 2.03
  • chr28:5,428,661 loading 0.0343
  • chr2:48,019,031 loading -0.0318
  • chr2:8,786,956 loading 0.0314
PC2 z = -1.97
  • chr32:5,376,122 loading 0.0244
  • chr22:41,669,426 loading -0.0232
  • chr9:23,202,173 loading 0.0228
Ancestry reconstruction error: 0.87
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