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CanVAS Bianchi · Founder
Cosmic medallion portrait of cHD4_249_cHD4_249, a Giant Schnauzer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD4_249_cHD4_249

cHD4_249_cHD4_249 is a Giant Schnauzer from the Bianchi research cohort. One of 14,478 dogs who built the atlas.

See cHD4_249_cHD4_249 in the atlas
About cHD4_249_cHD4_249

cHD4_249_cHD4_249 is a notable Giant Schnauzer - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
cHD4_249_cHD4_249's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD4_249_cHD4_249's. Click any of them to keep exploring.

  1. cHD5_337_cHD5_337 Giant Schnauzer 18.90
  2. cHD4_243_cHD4_243 Giant Schnauzer 19.89
  3. cHD5_343_cHD5_343 Giant Schnauzer 20.08
  4. cHD5_356_cHD5_356 Giant Schnauzer 20.24
  5. cHD5_338_cHD5_338 Giant Schnauzer 20.48
cHD4_249_cHD4_249's breed

cHD4_249_cHD4_249 sits in the Giant Schnauzer cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Giant Schnauzer 86%
  2. Labrador Retriever 8%
  3. Golden Retriever 6%
Source

From the CanVAS (Bianchi cohort) . Breed-page reference: Giant Schnauzer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL A/A
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/T
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.803
y -1.388
z -9.125
PCA-256 distance from breed centroid
24.91
Outlier percentile in breed
76
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD4_249_cHD4_249 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC24 z = -7.16
  • chr14:38,750,828 loading 0.0251
  • chr13:12,818,239 loading 0.0246
  • chr14:35,144,168 loading 0.0243
PC23 z = 5.76
  • chr35:14,154,465 loading 0.0292
  • chr12:39,598,521 loading 0.0284
  • chr13:8,570,429 loading -0.0283
PC220 z = 4.43
  • chr23:1,615,600 loading 0.0324
  • chr16:44,022,534 loading 0.0322
  • chr20:3,540,281 loading -0.0307
Ancestry reconstruction error: 0.39
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