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CanVAS Bianchi · Founder
Cosmic medallion portrait of cHD5_354_cHD5_354, a Giant Schnauzer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD5_354_cHD5_354

cHD5_354_cHD5_354 is a Giant Schnauzer from the Bianchi research cohort. One of 14,478 dogs who built the atlas.

See cHD5_354_cHD5_354 in the atlas
About cHD5_354_cHD5_354

cHD5_354_cHD5_354 sits at the edge of the Giant Schnauzer cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
cHD5_354_cHD5_354's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD5_354_cHD5_354's. Click any of them to keep exploring.

  1. cHD5_319_cHD5_319 Giant Schnauzer 18.19
  2. cHD5_352_cHD5_352 Giant Schnauzer 18.70
  3. cHD5_366_cHD5_366 Giant Schnauzer 20.11
  4. cHD5_351_cHD5_351 Giant Schnauzer 20.82
  5. cHD4_263_cHD4_263 Giant Schnauzer 21.36
cHD5_354_cHD5_354's breed

cHD5_354_cHD5_354 sits in the Giant Schnauzer cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Giant Schnauzer 94%
  2. Labrador Retriever 6%
Source

From the CanVAS (Bianchi cohort) . Breed-page reference: Giant Schnauzer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/T
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.592
y -1.559
z -9.036
PCA-256 distance from breed centroid
21.87
Outlier percentile in breed
57
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD5_354_cHD5_354 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC24 z = -7.69
  • chr14:38,750,828 loading 0.0251
  • chr13:12,818,239 loading 0.0246
  • chr14:35,144,168 loading 0.0243
PC23 z = 6.09
  • chr35:14,154,465 loading 0.0292
  • chr12:39,598,521 loading 0.0284
  • chr13:8,570,429 loading -0.0283
PC25 z = 2.79
  • chr5:76,272,702 loading 0.0268
  • chr15:24,890,350 loading -0.0263
  • chr4:32,151,890 loading 0.0256
Ancestry reconstruction error: 0.31
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