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CanVAS Spatola · Founder
Cosmic medallion portrait of CNPP_CNPP_38, a Feral Dog Capeyork
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

CNPP_CNPP_38

CNPP_CNPP_38 is a Feral Dog Capeyork from the Spatola research cohort. One of 14,478 dogs who built the atlas.

See CNPP_CNPP_38 in the atlas
About CNPP_CNPP_38

CNPP_CNPP_38 sits near the center of the Feral Dog Capeyork cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
CNPP_CNPP_38's nearest neighbors

The five dogs in the atlas whose genomes sit closest to CNPP_CNPP_38's. Click any of them to keep exploring.

  1. CNPP_CNPP_132 Feral Dog Capeyork 35.26
  2. CNPP_CNPP_100 Feral Dog Capeyork 36.84
  3. CNPP_CNPP_111 Feral Dog Capeyork 37.13
  4. CNPP_CNPP_49 Feral Dog Capeyork 37.56
  5. CNPP_CNPP_96 Feral Dog Capeyork 38.36
CNPP_CNPP_38's breed

CNPP_CNPP_38 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 52%
  2. Golden Retriever 48%
Source

From the CanVAS (Spatola cohort) . Breed-page reference: Feral Dog Capeyork.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 T/C
MC1R C/C
Ear set
MSRB3 G/G
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -5.838
y 3.673
z 5.904
PCA-256 distance from breed centroid
38.94
Outlier percentile in breed
25
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which CNPP_CNPP_38 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC255 z = 5.52
  • chr23:37,041,440 loading 0.0347
  • chr1:100,944,840 loading 0.0344
  • chr1:101,382,836 loading -0.0320
PC31 z = 5.40
  • chr4:74,176,809 loading 0.0309
  • chr3:63,796,388 loading 0.0306
  • chr7:9,211,951 loading 0.0296
PC214 z = -4.20
  • chr22:26,809,841 loading 0.0329
  • chr13:7,517,248 loading -0.0323
  • chr26:11,829,785 loading 0.0322
Ancestry reconstruction error: 0.56
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