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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of DD_14598_DD_14598, a Dandie Dinmont
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

DD_14598_DD_14598

DD_14598_DD_14598 is a Dandie Dinmont from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See DD_14598_DD_14598 in the atlas
About DD_14598_DD_14598
  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
DD_14598_DD_14598's nearest neighbors

The five dogs in the atlas whose genomes sit closest to DD_14598_DD_14598's. Click any of them to keep exploring.

  1. DD_27784_DD_27784 Dandie Dinmont 16.11
  2. DD_33782_DD_33782 Dandie Dinmont 16.95
  3. DD_26698_DD_26698 Dandie Dinmont 17.40
  4. PFZ43F04_PFZ43F04 Dandie Dinmont Terrier 18.46
  5. PFZ34E05_PFZ34E05 Rat Terrier 67.41
DD_14598_DD_14598's breed

DD_14598_DD_14598 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 56%
  2. Labrador Retriever 44%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Dandie Dinmont.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/T
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.018
y 1.250
z 2.401
Top-3 principal components by |z|

The 3 PCs on which DD_14598_DD_14598 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC227 z = -11.61
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
PC203 z = -8.75
  • chr1:100,458,946 loading 0.0361
  • chr1:100,542,384 loading 0.0353
  • chr24:4,330,562 loading -0.0340
PC219 z = -6.56
  • chr11:18,600,601 loading 0.0312
  • chr14:14,201,384 loading 0.0302
  • chr3:6,077,116 loading -0.0298
Ancestry reconstruction error: 0.94 (high - dog sits between cluster centroids)
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