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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of Dob_LU143_Dob_LU143, a Doberman Pinscher
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Dob_LU143_Dob_LU143

Dob_LU143_Dob_LU143 is a Doberman Pinscher from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See Dob_LU143_Dob_LU143 in the atlas
About Dob_LU143_Dob_LU143

Dob_LU143_Dob_LU143 sits well inside the Doberman Pinscher cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
Dob_LU143_Dob_LU143's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Dob_LU143_Dob_LU143's. Click any of them to keep exploring.

  1. Dob_LU164_Dob_LU164 Doberman Pinscher 19.96
  2. Dob_LU146_Dob_LU146 Doberman Pinscher 20.52
  3. W_Dob_Dob_LU164 Doberman Pinscher 20.84
  4. W_Dob_Dob_LU146 Doberman Pinscher 21.23
  5. PFZ43A08_PFZ43A08 Doberman Pinscher 21.75
Dob_LU143_Dob_LU143's breed

Dob_LU143_Dob_LU143 sits in the Doberman Pinscher cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Doberman Pinscher 95%
  2. Golden Retriever 5%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Doberman Pinscher.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/G
LCORL A/A
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.248
y 0.910
z 11.620
PCA-256 distance from breed centroid
20.46
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Dob_LU143_Dob_LU143 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC14 z = -5.87
  • chr2:9,971,173 loading 0.0294
  • chr24:32,514,754 loading -0.0259
  • chr24:20,979,390 loading -0.0251
PC15 z = 4.75
  • chr27:9,604,099 loading 0.0251
  • chr9:58,501,670 loading -0.0250
  • chr9:46,847,361 loading 0.0246
PC16 z = 3.15
  • chr12:35,746,865 loading 0.0308
  • chr23:4,266,972 loading -0.0287
  • chr12:34,964,869 loading 0.0275
Ancestry reconstruction error: 0.23
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