Skip to main content
snıff
CanVAS HaywardDeaf · Founder
Cosmic medallion portrait of ES38a_ES38a, a English Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

ES38a_ES38a

ES38a_ES38a is a English Setter from the HaywardDeaf research cohort. One of 14,478 dogs who built the atlas.

See ES38a_ES38a in the atlas
About ES38a_ES38a

ES38a_ES38a is a notable English Setter - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
ES38a_ES38a's nearest neighbors

The five dogs in the atlas whose genomes sit closest to ES38a_ES38a's. Click any of them to keep exploring.

  1. ES70_ES70 English Setter 11.52
  2. ES37a_ES37a English Setter 12.65
  3. ES57_ES57 English Setter 13.00
  4. ES71_ES71 English Setter 21.56
  5. ES72_ES72 English Setter 21.62
ES38a_ES38a's breed

ES38a_ES38a sits in the English Setter cluster, with genome overlap to Dalmatian, Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Setter 69%
  2. Dalmatian 14%
  3. Labrador Retriever 8%
  4. Golden Retriever 8%
Source

From the CanVAS (HaywardDeaf cohort) . Breed-page reference: English Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL A/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.210
y -2.653
z -2.630
PCA-256 distance from breed centroid
52.40
Outlier percentile in breed
82
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which ES38a_ES38a scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC209 z = -7.13
  • chr7:5,846,709 loading 0.0374
  • chr7:2,256,768 loading -0.0351
  • chr25:8,169,704 loading 0.0337
PC186 z = -5.75
  • chr3:6,234,729 loading 0.0318
  • chr23:19,305,339 loading 0.0317
  • chr19:17,376,904 loading 0.0316
PC207 z = -4.91
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
Ancestry reconstruction error: 0.66
Back to the Atlas →