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CanVAS Shannon · Founder
Cosmic medallion portrait of ESt_GT164_ESt_GT164, a English Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

ESt_GT164_ESt_GT164

ESt_GT164_ESt_GT164 is a English Setter from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See ESt_GT164_ESt_GT164 in the atlas
About ESt_GT164_ESt_GT164

ESt_GT164_ESt_GT164 is a notable English Setter - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
ESt_GT164_ESt_GT164's nearest neighbors

The five dogs in the atlas whose genomes sit closest to ESt_GT164_ESt_GT164's. Click any of them to keep exploring.

  1. ESt_GT166_ESt_GT166 English Setter 12.57
  2. ESt_GT167_ESt_GT167 English Setter 21.19
  3. ESt_GT168_ESt_GT168 English Setter 21.83
  4. ESt_GT170_ESt_GT170 English Setter 22.34
  5. ESt_GT169_ESt_GT169 English Setter 23.56
ESt_GT164_ESt_GT164's breed

ESt_GT164_ESt_GT164 sits in the English Setter cluster, with genome overlap to Gordon Setter, Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Setter 63%
  2. Gordon Setter 21%
  3. Golden Retriever 9%
  4. Labrador Retriever 8%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: English Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.310
y -2.631
z -2.472
PCA-256 distance from breed centroid
57.42
Outlier percentile in breed
85
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which ESt_GT164_ESt_GT164 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC149 z = 6.30
  • chr14:37,146,317 loading 0.0319
  • chr1:49,304,485 loading -0.0313
  • chr1:61,522,946 loading -0.0291
PC137 z = -5.29
  • chr22:28,989,668 loading 0.0410
  • chr22:28,783,539 loading -0.0357
  • chr19:1,162,032 loading 0.0337
PC136 z = 5.10
  • chr13:1,840,654 loading 0.0379
  • chr19:3,379,845 loading -0.0360
  • chr26:3,121,537 loading -0.0358
Ancestry reconstruction error: 0.72
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