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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of FSp_GT187_FSp_GT187, a Finnish Spitz
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

FSp_GT187_FSp_GT187

FSp_GT187_FSp_GT187 is a Finnish Spitz from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See FSp_GT187_FSp_GT187 in the atlas
About FSp_GT187_FSp_GT187

FSp_GT187_FSp_GT187 sits well inside the Finnish Spitz cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
FSp_GT187_FSp_GT187's nearest neighbors

The five dogs in the atlas whose genomes sit closest to FSp_GT187_FSp_GT187's. Click any of them to keep exploring.

  1. FSp_GT189_FSp_GT189 Finnish Spitz 14.17
  2. FSp_GT185_FSp_GT185 Finnish Spitz 15.66
  3. FSp_GT188_FSp_GT188 Finnish Spitz 15.68
  4. FSp_GT195_FSp_GT195 Finnish Spitz 15.77
  5. FSp_GT193_FSp_GT193 Finnish Spitz 16.11
FSp_GT187_FSp_GT187's breed

FSp_GT187_FSp_GT187 sits in the Finnish Spitz cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Finnish Spitz 76%
  2. Golden Retriever 15%
  3. Labrador Retriever 9%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Finnish Spitz.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.211
y 14.806
z -2.581
PCA-256 distance from breed centroid
52.88
Outlier percentile in breed
46
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which FSp_GT187_FSp_GT187 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC108 z = 12.69
  • chr7:42,690,827 loading 0.0435
  • chr21:34,428,857 loading -0.0342
  • chr34:4,429,712 loading -0.0326
PC106 z = -9.32
  • chr3:6,720,531 loading 0.0359
  • chr6:29,063,786 loading -0.0348
  • chr3:6,180,668 loading 0.0337
PC107 z = 7.85
  • chr10:6,497,921 loading 0.0390
  • chr3:5,565,848 loading -0.0351
  • chr3:6,720,531 loading 0.0336
Ancestry reconstruction error: 0.60
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