Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of FSp_GT190_FSp_GT190, a Finnish Spitz
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

FSp_GT190_FSp_GT190

FSp_GT190_FSp_GT190 is a Finnish Spitz from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See FSp_GT190_FSp_GT190 in the atlas
About FSp_GT190_FSp_GT190

FSp_GT190_FSp_GT190 sits near the center of the Finnish Spitz cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
FSp_GT190_FSp_GT190's nearest neighbors

The five dogs in the atlas whose genomes sit closest to FSp_GT190_FSp_GT190's. Click any of them to keep exploring.

  1. FSp_GT196_FSp_GT196 Finnish Spitz 15.58
  2. FSp_GT185_FSp_GT185 Finnish Spitz 16.11
  3. FSp_GT193_FSp_GT193 Finnish Spitz 16.39
  4. FSp_GT186_FSp_GT186 Finnish Spitz 16.45
  5. FSp_GT192_FSp_GT192 Finnish Spitz 17.09
FSp_GT190_FSp_GT190's breed

FSp_GT190_FSp_GT190 sits in the Finnish Spitz cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Finnish Spitz 73%
  2. Golden Retriever 16%
  3. Labrador Retriever 11%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Finnish Spitz.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.211
y 14.807
z -2.580
PCA-256 distance from breed centroid
49.16
Outlier percentile in breed
5
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which FSp_GT190_FSp_GT190 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC108 z = 11.57
  • chr7:42,690,827 loading 0.0435
  • chr21:34,428,857 loading -0.0342
  • chr34:4,429,712 loading -0.0326
PC106 z = -8.71
  • chr3:6,720,531 loading 0.0359
  • chr6:29,063,786 loading -0.0348
  • chr3:6,180,668 loading 0.0337
PC107 z = 7.17
  • chr10:6,497,921 loading 0.0390
  • chr3:5,565,848 loading -0.0351
  • chr3:6,720,531 loading 0.0336
Ancestry reconstruction error: 0.61
Back to the Atlas →