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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of G4-HUC29-MALE-5955_G4-HUC29-MALE-5955, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

G4-HUC29-MALE-5955_G4-HUC29-MALE-5955

G4-HUC29-MALE-5955_G4-HUC29-MALE-5955 is a Boxer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See G4-HUC29-MALE-5955_G4-HUC29-MALE-5955 in the atlas
About G4-HUC29-MALE-5955_G4-HUC29-MALE-5955

G4-HUC29-MALE-5955_G4-HUC29-MALE-5955 sits at the edge of the Boxer cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
G4-HUC29-MALE-5955_G4-HUC29-MALE-5955's nearest neighbors

The five dogs in the atlas whose genomes sit closest to G4-HUC29-MALE-5955_G4-HUC29-MALE-5955's. Click any of them to keep exploring.

  1. PFZ24D12_PFZ24D12 Boxer 18.38
  2. F3-HUC16-MALE-N/A_F3-HUC16-MALE-N/A Boxer 19.74
  3. PFZ29F03_PFZ29F03 Boxer 19.75
  4. cHD11_129_cHD11_129 Boxer 19.99
  5. H3-HUC18-MALE-2344_H3-HUC18-MALE-2344 Boxer 20.09
G4-HUC29-MALE-5955_G4-HUC29-MALE-5955's breed

G4-HUC29-MALE-5955_G4-HUC29-MALE-5955 sits in the Boxer cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 86%
  2. Labrador Retriever 8%
  3. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 T/T
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.740
y 0.253
z -1.229
PCA-256 distance from breed centroid
17.78
Outlier percentile in breed
51
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which G4-HUC29-MALE-5955_G4-HUC29-MALE-5955 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -6.37
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC7 z = -3.17
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
PC5 z = -2.26
  • chr1:24,578,804 loading 0.0240
  • chr2:19,906,795 loading 0.0230
  • chr13:51,091,794 loading 0.0227
Ancestry reconstruction error: 0.19
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