Skip to main content
snıff
CanVAS Parker · Founder
Cosmic medallion portrait of GDJK_GDJK_24589, a Grand Basset Griffon Vendeen
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GDJK_GDJK_24589

GDJK_GDJK_24589 is a Grand Basset Griffon Vendeen from the Parker research cohort. One of 14,478 dogs who built the atlas.

See GDJK_GDJK_24589 in the atlas
About GDJK_GDJK_24589
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GDJK_GDJK_24589's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GDJK_GDJK_24589's. Click any of them to keep exploring.

  1. GDJK_GDJK_24316 Grand Basset Griffon Vendeen 7.53
  2. UCLA_Isr_UCLA_Isr Gray Wolf 14.84
  3. Wlf_LUb3_Wlf_LUb3 Gray Wolf 26.80
  4. UCLA_In3_UCLA_In3 Gray Wolf 27.15
  5. WOLF-India_WOLF_24892 Wolf India 27.18
GDJK_GDJK_24589's breed

GDJK_GDJK_24589 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 67%
  2. Golden Retriever 33%
Source

From the CanVAS (Parker cohort) . Breed-page reference: Grand Basset Griffon Vendeen.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/A
LCORL A/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.620
y 19.996
z 10.519
Top-3 principal components by |z|

The 3 PCs on which GDJK_GDJK_24589 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC67 z = -11.49
  • chr20:37,137,374 loading 0.0345
  • chr37:21,909,127 loading -0.0321
  • chr23:49,705,023 loading 0.0289
PC61 z = -7.94
  • chr11:47,398,568 loading 0.0283
  • chr13:20,879,550 loading -0.0282
  • chr14:35,441,828 loading -0.0282
PC65 z = 7.72
  • chr22:2,271,992 loading 0.0371
  • chr22:2,231,766 loading 0.0357
  • chr22:1,808,281 loading 0.0355
Ancestry reconstruction error: 0.85
Back to the Atlas →