Skip to main content
snıff
CanVAS Spatola · Founder
Cosmic medallion portrait of GORD_GSET_28456, a Gordon Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GORD_GSET_28456

GORD_GSET_28456 is a Gordon Setter from the Spatola research cohort. One of 14,478 dogs who built the atlas.

See GORD_GSET_28456 in the atlas
About GORD_GSET_28456

GORD_GSET_28456 sits at the edge of the Gordon Setter cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
GORD_GSET_28456's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GORD_GSET_28456's. Click any of them to keep exploring.

  1. GORD_GSET_26995 Gordon Setter 15.54
  2. GORD_GoS_0LU607 Gordon Setter 26.73
  3. GORD_GoS_0LU606 Gordon Setter 31.15
  4. GORD_GoS_0LU613 Gordon Setter 32.50
  5. GORD_GoS_0LU616 Gordon Setter 32.63
GORD_GSET_28456's breed

GORD_GSET_28456 sits in the Gordon Setter cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Gordon Setter 76%
  2. Labrador Retriever 14%
  3. Golden Retriever 10%
Source

From the CanVAS (Spatola cohort) . Breed-page reference: Gordon Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 –
HMGA2 C/T
SMAD2 A/G
LCORL A/G
STC2 –
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 –
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 –
Skull shape
BMP3 –
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 0.473
y -0.365
z 3.852
PCA-256 distance from breed centroid
39.47
Outlier percentile in breed
66
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GORD_GSET_28456 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC55 z = 5.05
  • chr24:21,414,064 loading 0.0303
  • chr22:46,871,951 loading -0.0285
  • chr34:8,498,060 loading -0.0284
PC54 z = -3.60
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
PC56 z = -3.48
  • chr4:50,564,575 loading 0.0345
  • chr20:9,086,763 loading 0.0319
  • chr15:1,031,002 loading -0.0297
Ancestry reconstruction error: 0.47
Back to the Atlas →