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CanVAS Shannon · Founder
Cosmic medallion portrait of GoS_LU616_GoS_LU616, a Gordon Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GoS_LU616_GoS_LU616

GoS_LU616_GoS_LU616 is a Gordon Setter from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See GoS_LU616_GoS_LU616 in the atlas
About GoS_LU616_GoS_LU616

GoS_LU616_GoS_LU616 sits near the center of the Gordon Setter cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GoS_LU616_GoS_LU616's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GoS_LU616_GoS_LU616's. Click any of them to keep exploring.

  1. GoS_LU606_GoS_LU606 Gordon Setter 13.79
  2. GoS_LU625_GoS_LU625 Gordon Setter 17.71
  3. GoS_LU613_GoS_LU613 Gordon Setter 20.46
  4. GoS_LU629_GoS_LU629 Gordon Setter 26.01
  5. GoS_LU631_GoS_LU631 Gordon Setter 27.62
GoS_LU616_GoS_LU616's breed

GoS_LU616_GoS_LU616 sits in the Gordon Setter cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Gordon Setter 84%
  2. Labrador Retriever 8%
  3. Golden Retriever 8%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Gordon Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/G
LCORL A/A
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.683
y 4.206
z -7.032
PCA-256 distance from breed centroid
27.38
Outlier percentile in breed
22
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GoS_LU616_GoS_LU616 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC55 z = 7.73
  • chr24:21,414,064 loading 0.0303
  • chr22:46,871,951 loading -0.0285
  • chr34:8,498,060 loading -0.0284
PC54 z = -5.72
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
PC56 z = -3.98
  • chr4:50,564,575 loading 0.0345
  • chr20:9,086,763 loading 0.0319
  • chr15:1,031,002 loading -0.0297
Ancestry reconstruction error: 0.46
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