Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grls57OM3AA, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls57OM3AA

GRLS_grls57OM3AA is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls57OM3AA in the atlas
About GRLS_grls57OM3AA

GRLS_grls57OM3AA is a notable Golden Retriever - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls57OM3AA's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls57OM3AA's. Click any of them to keep exploring.

  1. GRLS_grlsH9DZUL00 Golden Retriever 36.10
  2. GRLS_grlsZNHICC44 Golden Retriever 37.41
  3. PILOT_grls8IS21DOO Golden Retriever 37.74
  4. GRLS_grlsSH7J89BB Golden Retriever 38.16
  5. GRLS_grlsD39GLKHH Golden Retriever 38.29
GRLS_grls57OM3AA's breed

GRLS_grls57OM3AA sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.052
y 9.663
z 8.162
PCA-256 distance from breed centroid
40.57
Outlier percentile in breed
79
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls57OM3AA scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC147 z = -3.72
  • chr20:14,856,460 loading 0.0316
  • chr10:6,497,921 loading 0.0302
  • chr10:6,396,863 loading 0.0301
PC149 z = 3.05
  • chr14:37,146,317 loading 0.0319
  • chr1:49,304,485 loading -0.0313
  • chr1:61,522,946 loading -0.0291
PC130 z = -3.04
  • chr6:33,386,202 loading 0.0387
  • chr6:30,876,588 loading 0.0376
  • chr6:30,769,727 loading -0.0372
Ancestry reconstruction error: 0.61
Back to the Atlas →