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Cosmic medallion portrait of GRLS_grlsLEL2TR77, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsLEL2TR77

GRLS_grlsLEL2TR77 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsLEL2TR77 in the atlas
About GRLS_grlsLEL2TR77

GRLS_grlsLEL2TR77 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsLEL2TR77's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsLEL2TR77's. Click any of them to keep exploring.

  1. PFZ22F06_PFZ22F06 Golden Retriever 33.19
  2. PFZ26F07_PFZ26F07 Golden Retriever 33.93
  3. Oldies_grls16d3723c Golden Retriever 34.43
  4. GRLS_grlsLFOHPMNN Golden Retriever 34.62
  5. GRLS_grlsQVL0ZFEE Golden Retriever 34.66
GRLS_grlsLEL2TR77's breed

GRLS_grlsLEL2TR77 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.413
y 10.106
z 8.081
PCA-256 distance from breed centroid
28.87
Outlier percentile in breed
19
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsLEL2TR77 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC170 z = 3.04
  • chr28:5,428,661 loading 0.0343
  • chr2:48,019,031 loading -0.0318
  • chr2:8,786,956 loading 0.0314
PC182 z = 3.03
  • chr7:40,535,333 loading 0.0363
  • chr7:41,489,243 loading 0.0356
  • chr15:32,204,502 loading 0.0340
PC197 z = -2.67
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
Ancestry reconstruction error: 0.53
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