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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of Gry_GT238_Gry_GT238, a Greyhound
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Gry_GT238_Gry_GT238

Gry_GT238_Gry_GT238 is a Greyhound from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See Gry_GT238_Gry_GT238 in the atlas
About Gry_GT238_Gry_GT238

Gry_GT238_Gry_GT238 sits well inside the Greyhound cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Gry_GT238_Gry_GT238's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Gry_GT238_Gry_GT238's. Click any of them to keep exploring.

  1. Gry_GT240_Gry_GT240 Greyhound 18.18
  2. Gry_GT242_Gry_GT242 Greyhound 18.26
  3. Gry_GT247_Gry_GT247 Greyhound 19.90
  4. Gry_GT243_Gry_GT243 Greyhound 20.92
  5. Gry_GT245_Gry_GT245 Greyhound 21.18
Gry_GT238_Gry_GT238's breed

Gry_GT238_Gry_GT238 sits in the Greyhound cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Greyhound 77%
  2. Golden Retriever 14%
  3. Labrador Retriever 9%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Greyhound.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.513
y -3.480
z 5.304
PCA-256 distance from breed centroid
46.89
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Gry_GT238_Gry_GT238 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC50 z = 5.91
  • chr22:2,473,315 loading 0.0334
  • chr22:1,969,643 loading -0.0326
  • chr4:32,946,669 loading -0.0320
PC202 z = 5.91
  • chr7:2,141,056 loading 0.0366
  • chr14:36,686,192 loading -0.0363
  • chr14:12,756,008 loading -0.0320
PC52 z = -5.36
  • chr36:18,815,377 loading 0.0327
  • chr5:64,065,611 loading -0.0306
  • chr12:41,906,189 loading 0.0276
Ancestry reconstruction error: 0.61
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