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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of GS_32603_GS_32603, a Giant Schnauzer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GS_32603_GS_32603

GS_32603_GS_32603 is a Giant Schnauzer from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See GS_32603_GS_32603 in the atlas
About GS_32603_GS_32603

GS_32603_GS_32603 sits well inside the Giant Schnauzer cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GS_32603_GS_32603's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GS_32603_GS_32603's. Click any of them to keep exploring.

  1. cHD5_339_cHD5_339 Giant Schnauzer 18.72
  2. PFZ17E06_PFZ17E06 Giant Schnauzer 18.76
  3. cHD5_338_cHD5_338 Giant Schnauzer 19.37
  4. cHD5_335_cHD5_335 Giant Schnauzer 19.42
  5. PFZ16E11_PFZ16E11 Giant Schnauzer 19.43
GS_32603_GS_32603's breed

GS_32603_GS_32603 sits in the Giant Schnauzer cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Giant Schnauzer 94%
  2. Labrador Retriever 6%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Giant Schnauzer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/G
LCORL A/A
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 T/T
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.918
y -1.291
z -9.098
PCA-256 distance from breed centroid
20.56
Outlier percentile in breed
44
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GS_32603_GS_32603 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC24 z = -6.15
  • chr14:38,750,828 loading 0.0251
  • chr13:12,818,239 loading 0.0246
  • chr14:35,144,168 loading 0.0243
PC23 z = 5.12
  • chr35:14,154,465 loading 0.0292
  • chr12:39,598,521 loading 0.0284
  • chr13:8,570,429 loading -0.0283
PC220 z = 3.40
  • chr23:1,615,600 loading 0.0324
  • chr16:44,022,534 loading 0.0322
  • chr20:3,540,281 loading -0.0307
Ancestry reconstruction error: 0.35
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