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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of IRW_19642_IRW_19642, a Irish Red And White Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

IRW_19642_IRW_19642

IRW_19642_IRW_19642 is a Irish Red And White Setter from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See IRW_19642_IRW_19642 in the atlas
About IRW_19642_IRW_19642
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
IRW_19642_IRW_19642's nearest neighbors

The five dogs in the atlas whose genomes sit closest to IRW_19642_IRW_19642's. Click any of them to keep exploring.

  1. IRW_18176_IRW_18176 Irish Red And White Setter 19.12
  2. IRW_19251_IRW_19251 Irish Red And White Setter 21.73
  3. IRW_19247_IRW_19247 Irish Red And White Setter 21.96
  4. IS_34583_IS_34583 Irish Setter 28.59
  5. IS_18850_IS_18850 Irish Setter 29.30
IRW_19642_IRW_19642's breed

IRW_19642_IRW_19642 sits in the English Setter cluster, with genome overlap to Gordon Setter, Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Setter 39%
  2. Gordon Setter 29%
  3. Golden Retriever 19%
  4. Labrador Retriever 13%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Irish Red And White Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.925
y 0.476
z 2.147
Top-3 principal components by |z|

The 3 PCs on which IRW_19642_IRW_19642 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC112 z = 3.24
  • chr3:6,565,383 loading 0.0418
  • chr18:10,714,022 loading 0.0387
  • chr3:6,720,531 loading 0.0365
PC98 z = -3.05
  • chr1:70,040,058 loading 0.0369
  • chr1:99,414,793 loading -0.0351
  • chr24:7,157,643 loading 0.0343
PC118 z = 2.65
  • chr13:4,612,002 loading 0.0350
  • chr13:4,346,598 loading 0.0329
  • chr10:6,497,921 loading 0.0313
Ancestry reconstruction error: 0.60
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