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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of IT_29138_IT_29138, a Irish Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

IT_29138_IT_29138

IT_29138_IT_29138 is a Irish Terrier from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See IT_29138_IT_29138 in the atlas
About IT_29138_IT_29138

IT_29138_IT_29138 is a strong genetic outlier within the Irish Terrier cluster - among the most distinctive examples of their breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
IT_29138_IT_29138's nearest neighbors

The five dogs in the atlas whose genomes sit closest to IT_29138_IT_29138's. Click any of them to keep exploring.

  1. IRIT_IRIT_27175 Irish Terrier 40.45
  2. IRIT_IRIT_27176 Irish Terrier 41.01
  3. IRIT_IRIT_27162 Irish Terrier 43.59
  4. IRIT_IRIT_27165 Irish Terrier 43.91
  5. IRIT_IRIT_27166 Irish Terrier 44.01
IT_29138_IT_29138's breed

IT_29138_IT_29138 sits in the Poodle cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Poodle 66%
  2. Golden Retriever 34%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Irish Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/T
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.146
y -0.508
z 3.483
PCA-256 distance from breed centroid
40.87
Outlier percentile in breed
100
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which IT_29138_IT_29138 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC247 z = -6.51
  • chr3:7,959,527 loading 0.0294
  • chr16:43,038,278 loading -0.0293
  • chr19:17,213,086 loading 0.0288
PC238 z = -6.14
  • chr19:11,652,672 loading 0.0365
  • chr13:13,884,830 loading -0.0338
  • chr3:70,346,120 loading -0.0302
PC254 z = 5.04
  • chr6:33,386,202 loading 0.0315
  • chr26:12,107,781 loading 0.0293
  • chr1:50,654,367 loading 0.0289
Ancestry reconstruction error: 0.90
Back to the Atlas →