Skip to main content
snıff
CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of IWS_32604_IWS_32604, a Irish Water Spaniel
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

IWS_32604_IWS_32604

IWS_32604_IWS_32604 is a Irish Water Spaniel from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See IWS_32604_IWS_32604 in the atlas
About IWS_32604_IWS_32604

IWS_32604_IWS_32604 is a notable Irish Water Spaniel - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
IWS_32604_IWS_32604's nearest neighbors

The five dogs in the atlas whose genomes sit closest to IWS_32604_IWS_32604's. Click any of them to keep exploring.

  1. PFZ30F02_PFZ30F02 Irish Water Spaniel 20.55
  2. cHD10_506_cHD10_506 Labrador Or Golden Retriever 34.82
  3. IWSP_IWSP_07556 Irish Water Spaniel 40.63
  4. IWSP_IWSP_27560 Irish Water Spaniel 40.63
  5. IWSP_IWSP_28373 Irish Water Spaniel 41.00
IWS_32604_IWS_32604's breed

IWS_32604_IWS_32604 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 51%
  2. Labrador Retriever 49%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Irish Water Spaniel.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.913
y 1.089
z 2.040
PCA-256 distance from breed centroid
33.99
Outlier percentile in breed
83
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which IWS_32604_IWS_32604 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC241 z = -5.50
  • chr29:25,388,461 loading 0.0320
  • chr9:34,293,305 loading 0.0320
  • chr6:50,176,215 loading 0.0305
PC243 z = 4.53
  • chr28:2,607,542 loading 0.0337
  • chr6:55,527,821 loading 0.0334
  • chr28:36,111,093 loading -0.0311
PC217 z = 4.48
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
Ancestry reconstruction error: 0.89
Back to the Atlas →