CanVAS Hayward2016 · Founder

LE7_LE7

LE7_LE7 is labelled Village Dog Lebanon Bekaa in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See LE7_LE7 in the atlas

About this name and portrait

I'm sure you probably guessed by now. These aren't real pictures of these dogs. And these aren't their real names.

But these dogs were real. They were alive. They were loved. We thought they deserved more than a subject ID to be remembered by. The portraits are built from each dog's actual genome, so we tried to get it close. But it's not enough.

We want to see your dog's face. We want to celebrate them by the name they were loved by. We want to look back and say 'oh yeah, Bosco? The Dachshund-Corgi mix? I remember him, his FGF4 variant was wild, those little legs could hold a small house.'

These dogs gave something most people don't realize. The Heroes in the Golden Retriever Lifetime Study showed up for blood draws, health surveys, fur and nail samples, every single year. Some of them for 14 years. Their data has taught us about lymphoma, hemangiosarcoma, and aging in ways that help not just dogs but potentially humans. And they didn't ask for any of it.

Morris Animal Foundation calls them Heroes. We agree.

If your dog was part of any of these studies, we want to give you their page. Their real name. Their real photo. The recognition they earned.

Email [email protected].

About LE7_LE7

Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
Carries one copy of the FGF4 chondrodysplasia retrogene.
Wire-coat furnishings - the eyebrow + beard variant at RSPO2.

LE7_LE7's nearest neighbors

The five dogs in the atlas whose genomes sit closest to LE7_LE7's. Click any of them to keep exploring.

LE7_LE7's breed

LE7_LE7's genome decomposes mostly into Golden Retriever, with additional weight on Labrador Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

Golden Retriever 53%
Labrador Retriever 47%

Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Lebanon Bekaa.

Full genotype detail

click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size

IGF1	A/A
HMGA2	C/T
SMAD2	A/G
LCORL	G/G
STC2	C/A
ADAMTS17	G/A

Leg length

FGF4·CFA18	T/C
FGF4·CFA12	C/C

Coat

RSPO2	T/T
FGF5	T/T
KRT71	C/C
MC1R	T/C

Ear set

MSRB3

G/G

Skull shape

BMP3	C/T
SMOC2	A/G

Technical details

click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position

x 5.136
y 3.365
z 0.742

Top-3 principal components by |z|

The 3 PCs on which LE7_LE7 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC26 z = -2.75

chr6:1,658,873 loading 0.0279
chr6:1,741,489 loading 0.0277
chr27:35,211,437 loading -0.0271

PC59 z = -2.11

chr13:17,017,437 loading 0.0335
chr22:61,087,087 loading -0.0324
chr13:7,369,721 loading -0.0313

PC165 z = 1.85

chr28:1,791,942 loading 0.0385
chr19:1,685,081 loading -0.0372
chr28:2,607,542 loading -0.0344

Ancestry reconstruction error: 0.50

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