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CanVAS Spatola · Founder
Cosmic medallion portrait of LHSA_LHSA_38E10, a Lhasa Apso
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

LHSA_LHSA_38E10

LHSA_LHSA_38E10 is a Lhasa Apso from the Spatola research cohort. One of 14,478 dogs who built the atlas.

See LHSA_LHSA_38E10 in the atlas
About LHSA_LHSA_38E10

LHSA_LHSA_38E10 sits at the edge of the Lhasa Apso cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
LHSA_LHSA_38E10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to LHSA_LHSA_38E10's. Click any of them to keep exploring.

  1. LHSA_LHSA_14E09 Lhasa Apso 15.22
  2. LHSA_LHSA_14D11 Lhasa Apso 15.47
  3. LHSA_LHSA_18C10 Lhasa Apso 15.84
  4. LHSA_LHSA_19B01 Lhasa Apso 16.21
  5. LHSA_LHSA_18G09 Lhasa Apso 16.41
LHSA_LHSA_38E10's breed

LHSA_LHSA_38E10 sits in the Lhasa Apso cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Lhasa Apso 73%
  2. Labrador Retriever 15%
  3. Golden Retriever 12%
Source

From the CanVAS (Spatola cohort) . Breed-page reference: Lhasa Apso.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.550
y 6.457
z 4.341
PCA-256 distance from breed centroid
48.90
Outlier percentile in breed
65
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which LHSA_LHSA_38E10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC236 z = -3.59
  • chr20:38,047,521 loading 0.0380
  • chr20:38,715,188 loading -0.0374
  • chr20:38,805,558 loading -0.0370
PC147 z = -2.96
  • chr20:14,856,460 loading 0.0316
  • chr10:6,497,921 loading 0.0302
  • chr10:6,396,863 loading 0.0301
PC31 z = -2.84
  • chr4:74,176,809 loading 0.0309
  • chr3:63,796,388 loading 0.0306
  • chr7:9,211,951 loading 0.0296
Ancestry reconstruction error: 0.31
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