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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ10B01_PFZ10B01, a Beagle
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ10B01_PFZ10B01

PFZ10B01_PFZ10B01 is a Beagle from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ10B01_PFZ10B01 in the atlas
About PFZ10B01_PFZ10B01

PFZ10B01_PFZ10B01 sits well inside the Beagle cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ10B01_PFZ10B01's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ10B01_PFZ10B01's. Click any of them to keep exploring.

  1. Bgl_GT9_Bgl_GT9 Beagle 15.60
  2. Bgl_GT7_Bgl_GT7 Beagle 16.52
  3. PFZ43G08_PFZ43G08 Beagle 16.99
  4. Bgl_GT2_Bgl_GT2 Beagle 17.06
  5. PFZ10E01_PFZ10E01 Beagle 17.14
PFZ10B01_PFZ10B01's breed

PFZ10B01_PFZ10B01 sits in the Beagle cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Beagle 85%
  2. Labrador Retriever 8%
  3. Golden Retriever 7%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Beagle.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/T
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 0.826
y 5.581
z 3.916
PCA-256 distance from breed centroid
22.90
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ10B01_PFZ10B01 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC47 z = 7.93
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
PC70 z = 7.06
  • chr13:1,243,516 loading 0.0318
  • chr13:1,443,325 loading -0.0301
  • chr18:21,034,428 loading 0.0292
PC90 z = -5.90
  • chr22:398,599 loading 0.0377
  • chr29:27,583,617 loading -0.0367
  • chr22:25,742,519 loading -0.0349
Ancestry reconstruction error: 0.22
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