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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ14D08_PFZ14D08, a American Eskimo Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ14D08_PFZ14D08

PFZ14D08_PFZ14D08 is a American Eskimo Dog from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ14D08_PFZ14D08 in the atlas
About PFZ14D08_PFZ14D08

PFZ14D08_PFZ14D08 sits well inside the American Eskimo Dog cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ14D08_PFZ14D08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ14D08_PFZ14D08's. Click any of them to keep exploring.

  1. PFZ14G07_PFZ14G07 American Eskimo Dog 18.93
  2. PFZ14G01_PFZ14G01 American Eskimo Dog 19.72
  3. PFZ14E07_PFZ14E07 American Eskimo Dog 20.23
  4. PFZ14D02_PFZ14D02 American Eskimo Dog 20.75
  5. PFZ15D02_PFZ15D02 American Eskimo Dog 22.08
PFZ14D08_PFZ14D08's breed

PFZ14D08_PFZ14D08 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 58%
  2. Labrador Retriever 42%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: American Eskimo Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/T
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.624
y 1.247
z 2.141
PCA-256 distance from breed centroid
39.05
Outlier percentile in breed
25
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ14D08_PFZ14D08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC236 z = 2.07
  • chr20:38,047,521 loading 0.0380
  • chr20:38,715,188 loading -0.0374
  • chr20:38,805,558 loading -0.0370
PC246 z = -1.92
  • chr4:78,506,139 loading 0.0305
  • chr26:20,960,217 loading -0.0303
  • chr22:28,657,814 loading -0.0289
PC194 z = -1.78
  • chr25:31,475,309 loading 0.0351
  • chr3:6,392,552 loading 0.0298
  • chr25:27,400,046 loading 0.0293
Ancestry reconstruction error: 0.63
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