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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ14E05_PFZ14E05, a Puli
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ14E05_PFZ14E05

PFZ14E05_PFZ14E05 is a Puli from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ14E05_PFZ14E05 in the atlas
About PFZ14E05_PFZ14E05
  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ14E05_PFZ14E05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ14E05_PFZ14E05's. Click any of them to keep exploring.

  1. PFZ14F06_PFZ14F06 Puli 21.08
  2. FP15_FP15 Village Dog French Polynesia Society Islands Raiatea 23.36
  3. 8233_8233 Village Dog Belize 23.59
  4. PFZ2G01_PFZ2G01 Xoloitzcuintli 23.59
  5. CHI_28183_CHI_28183 Chihuahua 23.63
PFZ14E05_PFZ14E05's breed

PFZ14E05_PFZ14E05 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 52%
  2. Golden Retriever 49%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Puli.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/T
Coat
RSPO2 T/T
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.612
y 1.319
z 1.884
Top-3 principal components by |z|

The 3 PCs on which PFZ14E05_PFZ14E05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC207 z = 2.00
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
PC238 z = 1.71
  • chr19:11,652,672 loading 0.0365
  • chr13:13,884,830 loading -0.0338
  • chr3:70,346,120 loading -0.0302
PC137 z = 1.70
  • chr22:28,989,668 loading 0.0410
  • chr22:28,783,539 loading -0.0357
  • chr19:1,162,032 loading 0.0337
Ancestry reconstruction error: 0.61
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