Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ15B10_PFZ15B10, a Irish Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ15B10_PFZ15B10

PFZ15B10_PFZ15B10 is a Irish Setter from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ15B10_PFZ15B10 in the atlas
About PFZ15B10_PFZ15B10

PFZ15B10_PFZ15B10 sits near the center of the Irish Setter cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ15B10_PFZ15B10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ15B10_PFZ15B10's. Click any of them to keep exploring.

  1. PFZ15F10_PFZ15F10 Irish Setter 17.53
  2. PFZ36B02_PFZ36B02 Irish Setter 17.68
  3. PFZ15A12_PFZ15A12 Irish Setter 18.54
  4. PFZ13H10_PFZ13H10 Irish Setter 18.79
  5. PFZ36C02_PFZ36C02 Irish Setter 19.21
PFZ15B10_PFZ15B10's breed

PFZ15B10_PFZ15B10 sits in the Irish Setter cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Irish Setter 81%
  2. Golden Retriever 12%
  3. Labrador Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Irish Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 2.889
y -0.029
z 2.599
PCA-256 distance from breed centroid
31.41
Outlier percentile in breed
22
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ15B10_PFZ15B10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC112 z = 7.97
  • chr3:6,565,383 loading 0.0418
  • chr18:10,714,022 loading 0.0387
  • chr3:6,720,531 loading 0.0365
PC98 z = -7.81
  • chr1:70,040,058 loading 0.0369
  • chr1:99,414,793 loading -0.0351
  • chr24:7,157,643 loading 0.0343
PC118 z = 7.16
  • chr13:4,612,002 loading 0.0350
  • chr13:4,346,598 loading 0.0329
  • chr10:6,497,921 loading 0.0313
Ancestry reconstruction error: 0.36
Back to the Atlas →