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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ15G02_PFZ15G02, a Komondor
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ15G02_PFZ15G02

PFZ15G02_PFZ15G02 is a Komondor from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ15G02_PFZ15G02 in the atlas
About PFZ15G02_PFZ15G02
  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ15G02_PFZ15G02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ15G02_PFZ15G02's. Click any of them to keep exploring.

  1. PFZ35C03_PFZ35C03 Komondor 18.24
  2. PFZ2H11_PFZ2H11 Village Dog Peru Loreto 21.17
  3. HR28_HR28 Posavski Goni 21.44
  4. PFZ1A02_PFZ1A02 Village Dog Peru Puno 21.49
  5. 8233_8233 Village Dog Belize 21.75
PFZ15G02_PFZ15G02's breed

PFZ15G02_PFZ15G02 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 54%
  2. Labrador Retriever 46%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Komondor.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL A/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.619
y 1.343
z 1.755
Top-3 principal components by |z|

The 3 PCs on which PFZ15G02_PFZ15G02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC217 z = 1.74
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
PC162 z = -1.73
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
PC231 z = -1.68
  • chr23:12,238,858 loading 0.0365
  • chr30:3,110,542 loading 0.0349
  • chr26:5,761,213 loading -0.0320
Ancestry reconstruction error: 0.64
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